Keto Chocolate Chip Muffins - Best Low-Carb Recipe

If you are looking for a delicious muffin recipe that you can enjoy without blowing up your keto diet, we have some great options for you.

Made with almond or coconut flour, these delicious sugar-free muffins are also gluten-free.

Low Carb Sugar-Free Chocolate Chip Muffins

Almond flour muffins can turn out dry, but this is not the case with these delicious treats!

You can bake these in a metal or silicone muffin pan, but be certain to either spray the pan or use muffin tin liners to keep the muffins from sticking.

The total time it will take you from start to finish is under 1 hour: prep time is just a few minutes and cook time is about 25 if using a traditional muffin pan.


  • 2 ½ cups almond flour

  • ½ cup Keto Goods Allulose Sweetener (or your favorite sugar substitute)

  • 3 tablespoons of Fiberyum Tapioca Soluble Fiber Syrup

  • 1 ½ teaspoon baking powder

  • 1 teaspoon sugar free cocoa powder

  • ¼ teaspoon salt

  • ⅓ cup coconut oil or melted butter (if using coconut oil, measure it as a solid then melt)

  • ⅓ cup unsweetened almond milk (regular or vanilla)

  • 3 large eggs (room temperature)

  • 1 teaspoon vanilla extract

  • ¾ cup sugar-free chocolate chips (regular or dark chocolate chips)


  • Preheat oven to 350 degrees.

  • Mix together all dry ingredients in a large bowl.

  • In a smaller bowl mix together all of the wet ingredients (oil or butter, milk, eggs, vanilla).

  • Pour the wet ingredients into the dry ingredients and mix well.

  • Fold in chocolate chips.

  • Distribute batter into 12 muffin cups (lined with paper liners)

  • Cook time is approximately 25 minutes. 

Nutritional information if cooking as described above:

Approximately 210 calories, 6 total carbs, 3 net carbs.

Keto Chocolate Chip Muffins: Recipe Variations

  • Keto blueberry muffins - add 3/4 cup of blueberries in place of the chocolate chips.

  • Keto strawberry banana muffins - replace the vanilla with sugar-free banana extract, and swap the chips for diced strawberries.

  • Keto peanut butter muffins - add 1/2 cup peanut butter to the recipe.

  • Crunch top muffins - Mix together 1/2 cup monk fruit brown sugar and 1/4 cup melted butter. Put the topping on the muffins before baking.

  • Cream cheese frosting - Make delicious cream cheese frosting by mixing 4 ounces of cream cheese, 2 tablespoons butter, 1/2 cup powdered sugar substitute, 1 teaspoon vanilla extract, and 1 tablespoon heavy cream.

  • Muffin tops: Some people enjoy the top of the muffins best. If this describes you, just bake our keto chocolate chip muffin recipe in a muffin top pan. Here is our favorite that is available on Amazon.

  • Dairy-free Muffins: Use oil instead of butter and dairy-free chips to make this recipe friendly to those who are lactose intolerant.